A Look Back at 2024: Progress Towards the Treatment of Aging as a Medical Condition

Another year has passed, and here we find ourselves once again another twelve months deeper into the 21st century and all of its promised wonders. The Golden Age science fiction authors were gloriously wrong in their extrapolation of trends of energy use, computation, and medicine, predicting a 21st century of slide-rules, ubiquitous heavy lift capacity into orbit and beyond, and a world in which 60-year olds still had bad hearts and little could be done about it. Instead, energy turned out to be hard, while computation enabled the biotechnology revolution and the prospect of longer, healthier lives through radical advances in medicine. Expansion into space awaits while we focus instead on the small-scale of our cellular biochemistry.

The trend in human life expectancy over the long term continues upwards, despite the short term negative impacts of obesity. Yet there remains a strong need for advocacy for aging research and the development of novel therapies to target the mechanisms of aging, even as this field grows apace. The progression of aging remains incompletely understood and much debated even given the more extensive knowledge of fundamental forms of damage that cause aging. The mainstream of our culture has yet to adopt a war on aging as it adopted the war on cancer. The advocacy of the first two decades of this century continues, but changing over time. Noted advocacy organizations SENS Research Foundation and Lifespan.io announced that they would merge; the book "The Death of Death" is now available in English, finally.

In part there is change because, unlike the early 2000s, there is now a longevity industry worthy of the name. It is a part of the broader biotech industry, and subject to the same perverse incentives, direct costs of regulation, and other issues that ensure a very long, slow development cycle. The pace of progress is nowhere as fast as we'd like it to be, even setting aside the terrible biotech investment market of the past two years, and some advocates have shifted their focus to this problem. Nonetheless, the wheel turns. Some of us are even optimistic about the next few decades. Meanwhile, the more adventurous arms of various governments are starting to come to the table to support areas of development, such as better measurement of biological age via clocks and other means, that are well underway. Typically one should expect to see government support arrive late to the table, in low-risk, high-attention areas that are already a foregone conclusion and well on their way to that conclusion. Thus ARPA-H is now entering the field of measurement and clock development.

A growing list of therapies are in preclinical development, a few programs reaching into clinical trials. Even if too many of the therapies under development aim only to modestly slow the progression of aging, there are still a good many potential rejuvenation therapies focused on repair of damage. This year, Fight Aging! noted updates from Cyclarity and Repair Biotechnologies (a few times, including at the Rejuvenation Startup Summit 2024) on atherosclerosis, Mitrix Bio on mitochondrial transplantation, Kimer Med on their implementation of the DRACO antiviral technology, Lygenesis on human trials of liver organoid implants. If you're looking for a broad view of the longevity industry and its progress, Aging Biotech Info continues to be a great resource; see an early 2024 interview with the maintainer for some of the background.

Last year's retrospective focused on categories of age-related disease rather than the forms of age-related damage outlined in the Strategies for Engineered Negligible Senescence (SENS) proposals, and was both less helpful and much more onerous to assemble as a result, I feel. So this year it is back to the fundamental causative mechanisms of aging, plus a couple of extra categories to cover some areas of personal interest.

Cell Loss / Atrophy

One of the most evident, early examples of cell loss leading to atrophy is the aging of the thymus, and the consequent loss of immune function that follows. Efforts to produce regeneration of the thymus lapsed for some years in the mid to late 2010s, but are now a going concern once more - multiple biotechnology companies are working on thymic regrowth. Replacement of cells via transplantation is one of the plausible paths forward to comprehensive therapy addressing cell loss and tissue atrophy, even where these cell therapies are really just ways to deliver signal molecules that adjust the behavior of native cells to increase regeneration. Cost-effective cell therapies will need universal cells, however. Progress is occurring on this front, but it is slow. Cell therapy examples from recent years include the ongoing efforts to provide new motor neurons to Parkinson's patients, delivery of cardiomyocytes to the aging heart, and cell therapy to restore the aged and atrophied thymus.

Beyond cell therapy lies tissue engineering and transplantation of that engineered tissue. This is a field with great promise, but which continues to struggle with goals such as creating the vasculature needed to support tissues larger than a few millimeters in size and speeding up the process of bioprinting. Cells survive transplantation better when introduced as tissue or in artificial tissue-like structures; it is even possible to provide those structures alone without the cells. A liver patch of only extracellular matrix produces benefits, for example. Recent work on tissue transplants include: efforts to replace portions of the neocortex; a clinical trial using sheets of corneal cells to replace a damaged cornea.

The alternative is to provoke replication in existing populations, such as by increasing stem cell function, or reactivation of developmental processes for replication in cell populations that normally do not replicate all that much in adults. A better understanding of how aged stem cells become dysfunctional than is presently the case will almost certainly be needed. Inroads are made in model organisms, but this area of research has the look of a long way to go yet. Changes in the stem cell niche, the supporting cells surrounding stem cells, are likely important. From the past year, a few examples of producing new cells in situ: gene therapy to promote cardiomyocyte replication in a damaged heart; more gene therapy to promote regeneration of lost sensory hair cells; yet more gene therapy to trigger muscle growth via MYC-1 expression; upregulation of cyclophilin A and increased PF4 both improve hematopoietic stem cell function; efforts to discover regulators of stem cell exhaustion; a similar search for regulators of neural stem cell function.

Mutation and Other Damage to Nuclear DNA

Stochastic DNA damage is mostly harmless, taking place in cells with few replications left, or in unusued regions of the genome. But mutations to stem cells and progenitor cells can spread throughout a tissue, producing somatic mosaicism. It remains unclear as to how important this is to aging, but most of the evidence for some role emerges from clonal hematopoiesis of indeterminate potential, somatic mosaicism in immune cells. This may contribute to kidney disease and risk of stroke, for example. What can be done about DNA damage? This seems a tough problem, but some paths forward have been suggested. Recently, it was discovered that natural examples of very efficient DNA damage response mechanisms can feasibly be transferred between species.

Damage in the structure of nuclear DNA and its surrounding machinery may be more subtle overall than simply mutational alterations to DNA sequences. For example, DNA damage and the repair response to that damage can indirectly cause RNA polymerase II to stall more often in reading DNA, altering gene expression for the worse. A fair number of researchers remain skeptics as to whether random mutation contributes meaningfully to aging. But research in recent years now suggests that random DNA double strand breaks and the resulting repair processes may alter the epigenetic regulation of nuclear DNA structure to cause many of the characterisitc changes in gene expression observed in aged tissues. To the extent that this is the case, we might think of partial reprogramming, a way to reset epigenetic expression by exposing cells to the Yamanaka factors, as a rejuvenation therapy. Certainly, a steady flow of animal studies of targeted reprogramming appear to demonstrate benefits. In the vasculature, for example, reducing hypertension. Or in the brain, where it reverses loss of cognitive function and is protective in models of neurodegeneration.

Another interesting field of study involves transposons, DNA sequences left behind by ancient viral infections that are repressed in youth, but run amok in later life to copy themselves across the genome, causing mutational damage. It remains unclear as to what degree this mechanism contributes to aging, but the research community is in search of the causes of transposon activation in later life. Perhaps the most intriguing evidence supports an important role for degree of transposon activity to determine the differences in life span between breeds of dog.

Mitochondrial Dysfunction

The pure SENS view of mitochondrial dysfunction is that the important component of it arises from damage to mitochondrial DNA. Researchers recently built a new cell model to better assess this mechanism. This is distinct from a more general malaise of impaired mitochondrial function that arises from gene expression changes with age, impairing mitochondrial dynamics, function, and the quality control process of mitophagy. It also results in mislocalized mitochondrial DNA fragments that provoke a maladaptive inflammatory response. These changes may result from cycles of DNA double strand break repair and their effects on nuclear DNA structure, and thus are downstream of damage to nuclear DNA. It remains clear as to how far one can go in restoring lost mitochondrial function by only restoring youthful gene expression, or improving mitophagy. Improvement in mitophagy is actually quite hard to measure, and there is much debate over the existing data for age-related mitophagy decline. Mitophagy interacts with the fusion and fission of mitochondria, and researchers have shown that adjusting the balance of fusion and fission in either direction can extend life in nematode worms. Equally, greater fragmentation of mitochondria due to excessive fission appears pathological in mammalian tissue.

Mitochondrial dysfunction is known to be important in muscle aging, in the heart and elsewhere in the body, and may interact with chronic inflammation to produce sarcopenia. Failing mitophagy is implicated in neurodegeneration, as is the consequent loss of mitochondrial function, an important mechanism in the aging of the brain. Mitochondrial dysfunction is also implicated in atherosclerosis, making the vascular cell dysfunction characteristic of the condition that much worse. Mitochondrial dysfunction has a role in ovarian aging, and in dry eye disease.

Approaches to address age-related mitochondrial dysfunction include allotopic expression of mitochondrial genes in the cell nucleus, less vulnerable to damage, and a backup source of mitochondrial proteins to prevent mutational damage to mitochondrial DNA from affecting mitochondrial function. Progress on this is taking place, but slowly; most recently researchers have produced a mouse lineage to demonstrate that ATP8 allotopic expression safely rescues function in loss of function ATP8 mutants. Then there is also the prospect of transplantation of functional mitochondria harvested from cultured cells or donor cells, shown to improve muscle function. Partial reprogramming of cells from aged tissues via short-term exposure to the Yamanaka factors has also been shown to improve mitochondrial function in the course of resetting epigenetic patterns. In terms of more targeted approaches to upregulate mitophagy, researchers have looked for targets in the function of HKDC1 and TFEB, but most of the mitophagy-related effort is focused on supplement-like molecules and their derivatives, such as the various groups working on urolithin A. While there are potential ways to increase the manufacture of new mitochondria, it isn't clear that this sort of enhancement will help in the aged environment.

Extracellular Matrix Damage

Changes in the physical properties of tissue due to age-related damage to the molecules of the extracellular matrix can produce cascading consequences. This is particularly true of stiffening of blood vessel walls, a contributing cause of hypertension, which in turn damages the delicate tissues of the kidney. Relatively little work takes place on this aspect of aging, and this line item in the SENS list of forms of molecular damage that drive aging includes more than just changes in physical properties. Any change in the extracellular matrix might change cell behavior for the worse in some way. There is every reason to think that a lot of this sort of thing takes place in the aging body, and that we have only scratched the surface of an understanding of it.

Senescent Cells

Senescent cells accumulate with age. They produce inflammatory signaling that is harmful to cell and tissue function, and encourages other cells to become senescent. Replication stress in cell populations may be an underappreciated source of senescence in later life. It is possible to correlate mortality to circulating levels of some of those signal molecules. Researchers have connected this signaling to the cells's response to the mutational damage that occurs as cells enter the senescent state. The consensus in the research community is that senescence is a complex state, or collection of states, and we remain far from a complete understanding of senescence. There are debates over whether everything presently classed as a senescent cell is in fact a senescent cell, or whether most of what are currently thought to be senescent tissue cells are in fact senescent tissue resident immune cells.

Nonetheless, senescent cells are linked to many age-related conditions and declines, and a selection of research from just the last year is extensive: skin aging is always a popular topic, and worthy of many mentions in the context of the burden of senescent cells; osteoporosis, particularly following menopause; macrophage signaling induces senescence in aging bone tissues; the onset of Alzheimer's disease and, for different reasons, Parkinson's disease; neurodegeneration more generally, such as via an increase in senescent T cells, increase in dysfunctional microglia, or aged neurons re-entering the cell cycle to become senescent; the relevance to neurodegeneration is worth emphasizing twice, as there is considerable enthusiasm in the research community for the development of therapies targeting senescent cells in the brain; moving on, there is the impairment of chemotherapy effectiveness by senescent cells; loss of capillary density in aged tissues; endothelial dysfunction in the vasculature; impairment of macrophage tissue maintenance functions; disruption of adrenal gland function; declining kidney function; excess cholesterol inside macrophages in atherosclerotic plaque provokes their senescence, contributing to the formation of unstable plaques prone to rupture; macular degeneration of retinal tissue; the aging of the heart and vasculature leading to cardiovascular disease; the role of senescent cells in cancer is both positive and negative for the patient, making the use of senolytic therapies more challenging than in other contexts; senescent B cells affect the ability of the immune system to garden the body's microbiomes; the aging of the ovaries; liver aging; loss of capacity for hair regrowth; the development of osteoarthritis; the secondary harms that follow stroke.

The first senolytic therapy combining dasatinib and quercertin continues to produce mostly promising results in clinical trials, most recently in older women with osteoporosis. The variety of senolytic therapies under development continues to grow at a fair pace year over year. Senolytic CAR-T therapies and adoptive transfer of other immune cells will likely be too expensive to be practical in the broader aging population, but continue to demonstrate promise in animal models. The cancer field may adopt these immunotherapy approaches to target senescent cancer cells, however. Topical applications of senolytics for skin aging continue to be developed, including a topical formulation of navitoclax shown to clear senescent cells from skin in mice. Novel biochemistry potentially relevant to therapies targeting senescence continues to be uncovered: PKM2 aggregation; that senescent cells use immune checkpoints to evade attention from immune cells; further, high mobility group proteins may turn out to be good targets to suppress senescence; and PAI-1 appears important in the creation of senescent cells.

A range of flavonoids are senolytic to varying degrees, and new ones are discovered on a regular basis, such as 4,4′-dimethoxychalcone. Researchers would like to improve the efficiency of flavonoid senolytics via delivery in nanocarriers, or by engineering better versions of molecules such as fisetin. Further, attempts are underway to find other natural compounds that can replace the chemotherapeutic drug dasatinib in the dasatinib and quecertin senolytic combination. The class of PI3K inhibitors continues to produce senolytic compounds. More diligent mapping of the surface features of senescent cells also continues to yield new targets for new selective ways to kill these errant cells. Researchers have proposed searching for senolytic lipids, and discovered a few that kill senescent cells via ferroptosis. Antidiabetic SGLT2 inhibitors are senolytic in overweight mice, but this seems likely to have little effect outside the context of obesity and the pathological diabetic metabolism. High intensity exercise is technically senolytic, but at the point at which we are calling lifestyle interventions senolytic, I feel the word begins to lose its meaning. At the end of the day, senolytics are just one part of a greater toolkit of rejuvenation therapies that will have to be used in combination.

An alternative approach to senolytics, less well developed, is to find ways to shut down the inflammatory signaling produced by senescent cells. It isn't clear that this is going to be as useful or progress as rapidly, given the incompletely understood complexity of the mechanisms by which senescent cells generate inflammation - but people are certainly working on it! Approaches to this end from the past year include CISD2 upregulation and selective sabotage of citrate metabolism.

Intracellular and Extracellular Waste, Including Amyloids

The amyloid-β that accumulates with age in the brain is an antimicrobial protein. This may explain associations between persistent viral infection and Alzheimer's disease, in that greater production of amyloid-β allows more of it to misfold and aggregate to contribute to Alzheimer's pathology. Other causes of amyloid-β aggregation may include the metabolic disruption produced by excess visceral fat. Amyloid-β may cause blood-brain barrier leakage, and this might be as important as other aspects of its pathology, such as provoking chronic inflammation and inhibiting synaptic proteasome function. While the amyloid cascade hypothesis remains firmly in the driver's seat of research strategy in the matter of Alzheimer's disease, one still finds fundamental debates taking place, such as whether it is the amyloid-β or other proteins that coincide with amyloid-β causing pathology, and the degree to which significant harms precede evident symptoms. More positively, it seems that loss of brain volume resulting from anti-amyloid therapies is not actually harmful, but results from clearance of amyloid. After amyloid-β in the progression of Alzheimer's disease comes tau aggregation and more severe harm to brain tissue. Tau aggregation induces inflammatory dysfunction in supporting cells in the brain, and consequent damage to synapses.

TDP-43 aggregation is a more recently discovered form of proteopathy relevant to neurodegeneration, and is more common than previously thought. It may also contribute to Huntington's disease pathology. Researchers continue to delve into the mechanisms of TDP-43 pathology. Attention has been given to NPTX2 as a link between TDP-43 aggregates and cell death. Like amyloid aggregation, TDP-43 aggregation may extend beyond brain tissue into the vasculature. Harm resulting from TDP-43 is not the only recent discovery! DDX5 also appears capable of forming prion-like aggregates.

The misfolding and aggregation of α-synuclein causes Parkinson's disease. α-synuclein pathology appears to interact with lipid metabolism in the brain, a bidirectional relationship shaping the spread of a synucleinopathy such as Parkinson's disease. As is the case for other protein aggregates associated with neurodegenerative conditions, α-synuclein aggregates can be found outside the brain - in skin, for example, or in exosomes in blood, opening the possibility of early detection. Outside the brain, researchers also see amyloid aggregates encouraging calcification in the heart. While thinking of the whole body, I should also note what would in a better world be a large area of research, into clearing out the various forms of lingering molecular waste, some of it altered proteins, that accumulate in the lysosomes of long-lived cells to cause dysfunction in normal recycling processes. Very little work takes place here, however; a few research teams, a few preclinical programs. In some years nothing comes to notice. This was one of those years.

In terms of approaches to clear protein aggregates, manipulating the behavior of microglia in the brain seems promising. Inhibition of p16 works, for example, perhaps by reducing the degree of senescence in this cell population. Also interfering in the LILRB4-APOE interaction, or upregulation of CCT2 to promote aggrephagy. Alternatively, there is the approach of preventing astrocytes from crowding out microglia and blocking access to amyloid plaques. Amyloid-targeting anticalins have been suggested as a strategy. Amyloid-β clearance via immunotherapy (with meaningful risk of unpleasant side-effects) is now a going concern, with enough data for meaningful commentary on what it might imply. It continues to appear that the amyloid cascade hypothesis is correct, and clearing amyloid in late disease stages doesn't help all that much. There, the target protein aggregate is hyperphosphorylated tau, and numerous approaches are under development. A more recent example is a clever evolution of proteolysis targeting chimera (PROTAC) technology that encourages the dephosphorylation of hyperphosphorylated tau, reducing the pace of aggregration. Another approach is delivery of anti-tau intrabodies via mRNA therapies. Others are investigating TYK2 inhibition as a way to slow the pace of pathological tau phosphorylation. For α-synuclein pathology, researchers are exploring use of a bacterial peptide that inhibits aggregate formation and antisense oligonucleotides to inhibit α-synuclein protein expression.

Gut Microbiome

Age-related alterations to the gut microbiome might arguably be added to the existing categories of SENS as another form of damage. This could occur independently of other mechanisms of aging, existing as a fundamental form of damage, even given that it is likely largely downstream of immune aging when it does occur over time. Loss of anti-microbial peptides may be important in reducing the ability of the immune system to garden the gut microbiome, for example. The gut microbiome is noted to be distinct in long-lived individuals. Harmful changes to the microbiome can be catalogued, but are far from fully understood. Nonetheless, these changes can be reversed independently of other aspects of aging by fecal microbiota transplantation from young donors to old recipients, producing benefits such as extended life span in animal models - or the reverse when transplanting an old microbiome into a young animal. Icariin is another approach to improving the composition of the gut microbiome. Flagellin immunization also works, demonstrated to extend life in mice. Sustained calorie restriction and intermittent fasting may improve the gut microbiome, or at least slow its aging. It is possible that delivery of genetically engineered microbes may also achieve useful goals, but this is far from proven in practice.

Restoration of a youthful gut microbiome may treat neurodegenerative conditions such as Parkinson's disease, and mechanisms to explain that outcome include its effects on astrocytes in the brain. Importantly, a clinical trial showed no benefits of fecal microbiota transplantation to patient's with Parkinson's disease. While the misfolding of α-synuclein characteristic of the condition may start in the gut in many patients, induced by a dysfunctional microbiome before spreading to the brain, addressing the gut contribution is likely too little, too late once evident symptoms have started. Despite this data point, the limited clinical trial data in humans for modification the gut microbiome, even transiently, is generally supportive of greater efforts in this direction.

Evidence exists for the gut microbiome to contribute to life span and numerous specific aspects of aging via mechanisms such as increased chronic inflammation: longevity in rabbits correlates with the gut microbiome composition, as do physiological changes in aged mice; aging of the ovaries; aging of the musculoskeletal system; increased risk of arrhythmia; Alzheimer's disease, where a fair amount of effort is devoted to trying to identify distinct microbial populations in patients, which may include infectious pathogens; reduced grip strength indicative of sarcopenia and frailty; loss of hematopoietic stem cell function; old individuals exhibit a distinct fungal gut microbiome; aging of bone leading to osteoporosis, and identification of specific features of the microbiome that correlate with this aspect of aging; the lymphatic system likely plays an important role in trafficking microbes and microbial metabolites from the intestine to the brain to cause harm; a novel way in which the aging microbiome may cause harm is by increasing intestinal permeability, allowing digestive enzymes to leak into tissues; it may also promote thymic involution, accelerating immune aging; rheumatoid arthritis may be driven by a distinct gut microbiome; menopause and the composition of the gut microbiome have a bidirectional relationship.

Cryonics

At the present pace of development of rejuvenation therapies, every older adult is going to age to death. Cryonics, the low temperature preservation of the structure of the mind following clinical death, remains a necessary industry in waiting. It has yet to exist in any way meaningful to the vast majority of people. Yes, one can be cryopreserved. No, the protocols are nowhere near as robust as we'd like them to be, and there are too few cryopreservation organizations to save more than a tiny handful of people.

There is a clear and well-defined roadmap for the technological capabilities needed to reach the fully developed, vast cryonics industry of the future. The road to turning the present small non-profit cryonics organizations into a full-fledged industry to compete with the grave and oblivion most likely starts with reversible cryopreservation of organs for the transplant industry. Solve that problem, and there is an engine to bring funds and interest into tissue preservation more generally. We will find ourselves half-way to convincing the world that the same can and should be done for people on the verge of death, to preserve them for a future in which both the technology and the will exist to safely restore a body and brain from both crypreservation and the damage of aging.

Aging Clocks

While not under the SENS heading, it is interesting to keep an eye on the development of clocks to assess biological age - or at least which are claimed to assess biological age. It may be fair to say that meaningful progress towards rejuvenation therapies can only occur to the degree to which we can effectively measure aging. This, at least, is a consensus sentiment in the research community. That community produces new clocks at quite the pace. In just the last year: a novel proteomic clock; an aging clock built from the senescence-associated secretory phenotype of senescent monocytes; a clock built from the metabolome called MileAge; a clock built from cheek swab DNA methylation data; a clock built from brain MRI imaging data; more novel transcriptomic clocks; the development of organ-specific proteomic clocks; a clock based on retrotransposon DNA methylation; aging clocks built from retinal imaging data; a clock based on protein aggregation; a physiological aging clock using clinical biomarker data.

A growing body of clinical trial data includes clock measures, enough now to start to say something about how useful the mainstream clocks are in practice. Some would argue it is time to stop building new clocks and standardize on the best of the established clocks. While epigenetic age acceleration in many clocks correlates well with age-related disease and mortality, a fair number of issues remain to be overcome. Existing clocks have many quirks, such as being responsive to psychological stress or time of day. Clock data is obtained from immune cells in a blood sample, and different immune cell populations exhibit different patterns of epigenetic aging, biasing results. This is also true when considering differences between mammalian species. Work on correcting this issue has led to the concept of intrinsic epigenetic age. Nonetheless, blood sample clocks do not generalize well to other tissues. The greatest challenge, however, is how to understand how the measured changes making up the clock actually relate to underlying processes of aging and disease. Some inroads are being made, such as separating harmful from adaptive changes and understanding how much of what is measured is epigenetic drift.

Other novel work on clocks this past year included: improvements to the Pace of Aging clock; advocacy for clocks built on clinical biomarkers and risk factors; a better grasp as to how lifestyle choices affect epigenetic age; demonstrating that modern clocks do show a slowing of aging for people exhibiting greater physical fitness; continued research into glycosylation clocks; quantifying the level of uncertainty we should expect from clocks that assess biological age; noting that chronic liver disease accelerates epigenetic aging in other organs; the negligibly senescent axoltl exhibits little alteration in the methylome over its lifespan, making it hard to construct something resembling the epigenetic clocks established for mammals; relating the existence of epigenetic clocks to theories of programmed aging; demonstrating that acccelerated aging correlates with cardiometabolic disease; Olympic medal winners exhibit slower expigenetic aging in comparison to other competitors; a demonstration that more recent epigenetic clocks do correlate with Alzheimer's disease risk.

Articles

Every year I note that I am not writing as much as I used to, or at least not directing said writing in the direction of the Fight Aging! audience as much used to be the case. There are more demands on my time than there used to be, or so it seems. Still, a few items from the past year are noted below.

At the End, the Wheel Turns

The more involved one is in the field of aging and longevity, the more one feels that the tremendously important work of building therapies to treat aging as a medical condition is crawling along at a very slow pace indeed. But step back, look in only every five years or so, and change is rapid. Progress is made. The wheel turns. It can never be fast enough in a world in which so very many people suffer and die from age-related disease each and every day, but this is a very different environment when compared to the state of affairs twenty years past. The 2040s will be amazing.

A CpG Oligodeoxynucleotide Promotes Bone Formation

Bone is constantly remodeled by the activities of osteoclasts and osteoblasts. Osteoclasts break down the extracellular matrix of bone, while osteoblasts create it. These activities are balanced in youth, but with advancing age a range of mechanisms operate to create a growing imbalance favoring osteoclasts. This steadily reduces bone density leading to osteoporosis and eventually life-threatening fracture risk. In principle any compensatory therapy should be beneficial, any way to suppress osteoclast or enhance osteoblast populations and activity regardless of whether or not underlying causes are targeted. In practice, finding good paths forward has been challenging, but researchers here report on their investigation of one potential new approach.

A CpG oligodeoxynucleotide (CpG-ODN), iSN40, was originally identified as promoting the mineralization and differentiation of osteoblasts, independent of Toll-like receptor 9 (TLR9). Since CpG ODNs are often recognized by TLR9 and inhibit osteoclastogenesis, this study investigated the TLR9 dependence and anti-osteoclastogenic effect of iSN40 to validate its potential as an osteoporosis drug.

The murine monocyte/macrophage cell line RAW264.7 was treated with the receptor activator of nuclear factor-κB ligand (RANKL) to induce osteoclast differentiation, then the effect of iSN40 on was quantified by tartrate-resistant acid phosphatase (TRAP) staining and real-time RT-PCR. iSN40 completely inhibited RANKL-induced differentiation into TRAP+ multinucleated osteoclasts by suppressing osteoclastogenic genes and inducing anti-/non-osteoclastogenic genes. Treatment with a TLR9 inhibitor or a mutation in the CpG motif of iSN40 abolished the intracellular uptake and anti-osteoclastogenic effect of iSN40.

These results demonstrate that iSN40 is subcellularly internalized and is recognized by TLR9 via its CpG motif, modulates RANKL-dependent osteoclastogenic gene expression, and ultimately inhibits osteoclastogenesis. Finally, iSN40 was confirmed to inhibit the osteoclastogenesis of RAW264.7 cells cocultured with the murine osteoblast cell line MC3T3-E1, presenting a model of bone remodeling. This study demonstrates that iSN40, which exerts both pro-osteogenic and anti-osteoclastogenic effects, may be a promising nucleic acid drug for osteoporosis.

Link: https://doi.org/10.3390/life14121572

Lithocholic Acid in Calorie Restriction

Researchers here argue for lithocholic acid, a bile acid produced when the gut microbiome processes bile, to be a player in the ability of calorie restriction to slow aging and extend life in short-lived species. Researchers have in the past noted that providing lithocholic acid to yeast slows cell aging, while centenarians exhibit a gut microbiome that produces more lithocholic acid. While reading this, it is worth remembering that while the mechanisms described exist, it is ever challenging to determine how much of the benefits of calorie restriction or an altered gut microbiome derive from pathways involving lithocholic acid. Therapies that target this could be interesting, or could be poor options. It is hard to tell without trying.

Generally speaking, bile is less interesting than is longevity, but that might soon change. Consisting mainly of water, bilirubin (a breakdown product of haemoglobin), cholesterol, and bile acids, this yellow-green fluid is synthesized in the liver, stored in the gallbladder and released into the small intestine to emulsify dietary fats and increase the absorption of fat-soluble vitamins. Gut-resident bacteria, such as species of Clostridium and Lactobacillus, convert primary bile acids into the secondary bile acids deoxycholic acid and LCA, some of which is reabsorbed into the bloodstream.

Previous work has identified bile acids as health-promoting compounds. Dafachronic acids, which are structurally related to LCA, extend the lifespans of nematode worms (Caenorhabditis elegans) and LCA extends the lifespans of yeast (Saccharomyces cerevisiae) and fruit flies. In mammals, LCA is not known to extend lifespan, but it does alter physiology in ways that are consistent with improved health, such as lowering levels of liver triglycerides, blood glucose, and systemic inflammation - in part, by activating the bile-acid receptor TGR5. LCA is also implicated in the lifespan-extending effects of transplanting gut microbiota from young mice into old mice, but how the bile acid might impart health benefits is unclear.

In a recent study researchers gave LCA to old mice for a month. These mice experienced health benefits reminiscent of those induced by calorie restriction, including improved muscle regeneration, grip strength, and sensitivity to insulin. These effects were dependent on AMPK. Interestingly, LCA raised levels of the hormone GLP-1 without causing muscle loss, unlike today's popular weight-loss drugs that bind to the GLP-1 receptor. In nematodes and flies, LCA activated AMPK, increased stress resistance and extended lifespan - benefits that were negated when the gene encoding AMPK was deleted in the animals.

After ruling out TGR5 as the mediator of LCA's effects, the researchers turned their attention to the enzyme SIRT1. They demonstrated that LCA stimulates SIRT1 to upregulate AMPK. The involvement of gut microbiota in the production of LCA and the benefits of calorie restriction might explain why faecal transplants from young animals improve the health and increase the lifespans of older animals, and why some mice do not respond to calorie restriction.

Link: https://doi.org/10.1038/d41586-024-04062-1

The Clinical Trial Abundance Proposals Seem Too Little to Lead to Meaningful Change

Regular readers will know that I'm not in favor of the present state of medical regulation. In this I am not alone. Many people think that some fraction of the cost of obtaining regulatory approval of new therapies is entirely unnecessary, some fraction of the degree of rigor imposed on manufacture and clinical trials is entirely unnecessary. Clinical trials conducted in Australia cost half of those conducted in the US or Europe, because the Australian community has declared that full Good Manufacturing Practice (GMP) procedures mandated by the FDA in the US and EMA in the EU are in fact unnecessary. Something like 10% of all early stage clinical trials worldwide take place in Australia. In that country the government has delegated ethics and assessment of risk to their equivalent of competing institutional review boards, each associated with a specific clinical trial center. It is a good example of the way in which centralization and diminished competition penalizes progress.

Do you think that the right number for the degree of waste currently imposed by regulators is half? More than half? Less than half? It is a huge cost in a world in which $30M to $40M is needed to move from preclinical proof to completing a phase 1 safety trial in a small number of volunteers in the US or EU. That cost means that a sizable fraction of potential medicines are never developed. Halve that cost and more medicines will be developed. Yet those within the system are very quick to defend the excess: regulatory capture rules, and the established pharma industry uses the regulatory system in order to reduce competition from upstate therapeutic developers. None of this is to the benefit of humanity as a whole.

Since the turn of the century, the cost of developing new therapies has more than doubled. The regulators ask for ever more proof, ever more tests, ever more rigor, never strongly penalized for the invisible graveyard of therapies and patients that results. This is how complex systems trapped in the later stages of regulatory capture move forward. The dominant players retain their dominance by becoming a part of the system that suppresses the potential for progress. This is widely recognized, and numerous patient advocacy groups have come, tried to change the system from within, largely failed, and vanished. The Clinical Trials Abundance project is one such, and by no means the most radical. I think their proposals change too little to make a difference even if implemented. I believe that the only path likely to lead to radical change is the development of a robust clinical development ecosystem outside the FDA, EMA, and related regulatory systems, built atop the present medical tourism infrastructure. Something to compete at a much lower price point.

The Case for Clinical Trial Abundance

The need to make drug development more efficient has become increasingly pressing. US healthcare spending growth is predicted to reach nearly 20% of GDP by 2032 and exceed GDP growth itself for structural reasons, like an aging society. Meanwhile, given high medication prices and little political appetite to cut Medicare spending, there is mounting pressure to reduce drug development costs. In the face of these cross-pressures, the best policy approach is a supply-side innovation agenda, aimed at lowering the costs of trials.

We have several reasons to be optimistic about our ability to cut clinical trial costs and timelines. One proof-of-concept is the RECOVERY trial, which cost about 1/80th of a traditional randomized controlled trial (RCT) and likely saved hundreds of thousands of lives by demonstrating the efficacy of steroids for COVID-19. RECOVERY showed the enormous cost and time savings possible if trials are kept tightly focused on important questions and trial enrollment/organization is made as easy as possible. We can also look at historic examples of large trials (e.g., the polio vaccine field trials) that ran on time and answered important questions, by avoiding cumbersome and unnecessary administrative delays.

Many stakeholders agree on the urgency of the problem, often framed as clinical trial modernization. Reducing the cost and difficulty of generating high-quality medical evidence is a rare area where most experts agree on the goals. Beyond these specifics, many of our memos follow the guiding question: "What would a permanent, US-scale RECOVERY trial look like and accomplish?" With dramatically cheaper trials, we would more quickly sift through poorly evidenced clinical practice. New therapies would cost less to test in humans, and we would have answers and innovation sooner. Beyond speeding up the approval of new drugs, cheaper and faster trials would also allow more kinds of questions to be asked. When a large trial costs $100 million to carry out, some questions simply don't get asked.

Urolithin A Derivatives Targeting Mitophagy in Clinical Trials

While there seems to be no firmly established mechanism by which urolithin A acts to modestly improve mitochondrial function, it seems presumed that this (and a number of other compounds, such as mitoQ) largely function via improving the operation of mitophagy. Mitophagy, mitochondrially targeted autophagy, is a maintenance process that removes damaged and worn mitochondria. Too little of that and the mitochondrial population in a cell become incrementally more dysfunctional. Impaired mitophagy and mitochondrial dysfunction are features of aging, while improved autophagy is a feature of cell stress responses and many interventions known to modestly slow aging in animal studies.

Vandria is one of a number of companies attempting to make therapies for age-related conditions based on novel modifications of established autophagy or mitophagy promoting compounds. Here, Vandria is noted to have started an initial clinical trial for a urolithin A derivative. So far, efforts in this direction have failed to improve on calorie restriction, and only the rapalogs have done better in some aspects than exercise. It remains to be seen as to how this line of work will fare. Certainly, the original urolithin A compound isn't all that impressive in animal studies.

Vandria SA, a company at the vanguard of mitochondrial therapeutics developing first-in-class small molecule mitophagy inducers, today announces that the first subjects have been dosed in its first-in-human clinical trial of its lead Central Nervous System (CNS) compound VNA-318. Readout of this combined single and multiple ascending dose trial is expected in the summer of 2025.

VNA-318 is an orally available first-in-class small molecule against a novel target to rejuvenate cells and treat age-related diseases through the induction of mitophagy. The target has strong genetic links to several human diseases including Alzheimer's disease. It has a dual mode of action with an immediate improvement of memory, learning, and cognitive function, paired with long-term disease-modifying effects such as reduced neuroinflammation, less toxic protein aggregation, and improved mitochondrial function, as shown in pre-clinical models of Alzheimer's and Parkinson's disease. Toxicity studies have demonstrated VNA-318 has a wide safety window. A composition of matter patent covering VNA-318 and other compounds has been issued by the US Patent Office.

This Phase 1 randomized, double-blind trial is a combined single and multiple ascending dose trial of VNA-318, designed to assess safety, tolerability, pharmacokinetic, and pharmacodynamic parameters in healthy male subjects.

Link: https://vandria.com/press-release-16122024/

Developing a Cell Model of Aging-Like Mitochondrial Mutational Damage

Mitochondria are the power plants of the cell, the distant descendants of symbiotic bacteria that carry their own small circular genome, distinct from that of the cell nucleus. The mitochondrial genome is more prone to damage and less well repaired than the nuclear genome, and mitochondrial DNA mutations are thought to be important in aging. Deletion mutations can create broken mitochondria that outcompete undamaged peers to take over a cell, creating a small number of harmfully dysfunctional cells. Less severe point mutations are more commonplace, but evidence is contradictory regarding the degree to which this form of damage contributes to mitochondrial dysfunction in aging. Hence the value of generating a cell model of aging-like mitochondrial damage, to better enable studies of the dysfunction it generates.

The consequences of heteroplasmic mitochondrial mutations have been challenging to study as genome editing for mitochondrial DNA (mtDNA) is limited and there are few established tools to alter heteroplasmy in vitro. Model systems such as the "mtDNA mutator" mouse containing a mutant polymerase gamma implicate mtDNA changes in many aging phenotypes. However, this mouse model induces a large mix of genome alterations often with mtDNA depletion in cells, yielding much more disruption than the clonally expanded heteroplasmic mutation events that occur in usual aging in vivo. Much of our current knowledge regarding heteroplasmy comes from comparisons of primary cells from patients with mtDNA mutations to controls, often with low mutant heteroplasmy and unmatched nuclear genetics, or from immortal "cybrid" cells, which have a malignant pathophysiology and limit the capacity to study the impact of heteroplasmy on cell fate and viability.

Reprogramming somatic cells to pluripotency has been shown to reverse some markers of aging, and expression of reprogramming factors is proposed as a potential rejuvenating therapy. However, the impact of mtDNA heteroplasmy on this process has not been queried. Although heteroplasmy of pathogenic mtDNA variants is typically stable for differentiated cells in culture, multiple recent studies established that heteroplasmy shifts significantly with reprogramming of primary cells to induced pluripotent stem cells (iPSCs). However, beyond this single-measure characterization, the impact of altered heteroplasmy on cell function, and particularly on the capacity for rejuvenation remains unexplored. This is a key area to understand as critical roles are rapidly evolving for mitochondrial metabolism in both maintenance of pluripotency and stem cell differentiation.

We note that the differential segregation of mtDNA heteroplasmy following iPSC generation offers a novel opportunity to understand the impact of clonal increases or decreases in mtDNA heteroplasmy on cellular function. We hypothesize that iPSCs with increased mtDNA heteroplasmy have functional adaptations consistent with cellular aging. Thus, we generated iPSC colonies from three primary fibroblast lines with known heteroplasmy of deleterious mtDNA mutations and quantified heteroplasmy of these mutations in resultant clones. We report that resultant clones displayed a primary bimodal distribution of mutation heteroplasmy. We determined that high-level mtDNA deletion mutant iPSCs exhibit distinct growth properties, metabolic profiles, and altered differentiation capacity, with growth and metabolic shifts mirroring a key subset of changes observed in aging-induced cell and tissue dysfunction.

Link: https://doi.org/10.1111/acel.14402

Fight Aging! Newsletter, December 30th 2024

Fight Aging! publishes news and commentary relevant to the goal of ending all age-related disease, to be achieved by bringing the mechanisms of aging under the control of modern medicine. This weekly newsletter is sent to thousands of interested subscribers. To subscribe or unsubscribe from the newsletter, please visit: https://www.fightaging.org/newsletter/

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Contents

The Dominance of Old Blood
https://www.fightaging.org/archives/2024/12/the-dominance-of-old-blood/

Over the past fifteen years, studies emerging from work on heterochronic parabiosis, in which the circulatory systems of an old mouse and a young mouse are linked, have given rise to a busy and expanding portion of the field of aging research. At first, researchers focused on possible factors in young blood that might beneficially alter the aged environment. That side of the house gave rise to Elevian's focus on GDF-15, transfusion studies in which old people were given blood fractions from young donors, and ongoing work to try to find some form of blood fraction that produces meaningful benefits. Later, researchers focused more on harmful factors in old blood, and this led to efforts focused on blood dilution as a therapeutic strategy. Hybrid approaches to adjust specific connections of signals in the blood, such as increasing oxytocin while decreasing TGF-β, have also arisen.

Still, while one can certainly find ways to obtain blood dilution or plasma transfer treatments in the clinical marketplace, none of this has made much progress towards validation in clinical trials and consequent widespread use. In the case of plasma transfusions, this may be because it just isn't that great as a mode of therapy; those trials that have taken place did not produce great results. In the case of plasma dilution, we may just need to wait for longer for larger trials to take place and more than proof of concept data to emerge. Today's open access review of the state of development in the world of old blood versus young blood is very much on the side of plasma dilution as the right way forward, which is no surprise given the identity of the authors.

The dominance of old blood, and age-related increase in protein production and noise

Over the past 20 years research in aging and longevity has suggested that aging is caused by an excess of certain systemic proteins, which while at young levels are needed for healthy tissues, become counterproductive when persistently elevated. This work narrowed the effects of blood heterochronicity to dilution of old plasma being sufficient for tissue rejuvenation. Young blood or young blood factors, while potentially efficacious, do not seem to be necessary, because dilution of the age-elevated proteins breaks the inhibitory feed-backs in cell-cell signaling pathways, consequentially restoring the levels of the age-diminished proteins in tissues and systemically.

After neutral blood exchange (NBE), there is robust rejuvenation of old muscle with less fibrosis; in liver, fibrosis is also reduced, and adiposity diminished; in brain, hippocampal neurogenesis becomes increased, neuroinflammation and SA-βGal+ senescence decline, and cognitive capacity improves. Thus, this rejuvenation is to the whole body, simultaneously affecting multiple aspects of multiple tissues, in which for many parameters the old animals become statistically the same as young. In old people, an analogous procedure of therapeutic plasma exchange (TPE), resets to a younger state the blood proteins that control homeostasis and regeneration, immune responses, brain health and function, similar to the NBE effects in mice. Moreover, TPE rejuvenated the immune system and reduced measured human biological or health age.

In TPE and NBE, the red blood cells and white blood cells are returned to the patient, and the plasma is disposed, composed mostly of saline, albumin, immunoglobulins, fibrin, and soluble signaling factors. A replacement fluid is added back, consisting of a saline with added purified albumin, and immunoglobulins may also be added. Albumin itself interacts with or binds weakly to many circulating proteins and modulates their activity and specificity. The robust rejuvenation of multiple old tissues described above, is unlikely to be established by rare proteins bound to the introduced albumin, as this is a biochemically purified protein, it isn't "young" or "old". Yet, it might be that the purified albumin, cleaned of other interacting proteins, is now free to interact with endogenous blood proteins and modify their activity, e.g., attenuating the effects of age-elevated proteins.

In this review we emphasize the potential of diluting age-elevated proteins as the way to re-calibrate the systemic proteome to its younger state without donor blood. Furthermore, we introduce modulation of proteome noise, as an important part of understanding tissue aging and as a critical mechanism for tissue rejuvenation. We discuss studies on the dominance of aged systemic milieu in promoting progeric phenotypes in young cells, in vitro, and in multiple tissues of young animals, in vivo. We support our arguments with evidence showing a significant age-related increase in protein synthesis, in noise of newly synthesized proteomes, and in the rapid induction of these aging phenotypes in young muscle by exposure to aged tissue. We summarize the significance of these findings for future research on aging and longevity.

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Cellular Senescence as a Contributing Cause of Secondary Harms Following Stroke
https://www.fightaging.org/archives/2024/12/cellular-senescence-as-a-contributing-cause-of-secondary-harms-following-stroke/

Stroke is the blockage or rupture of a blood vessel in the brain, leading to significant damage to brain tissue and consequent loss of function. Beyond the immediate harm it is now well known that stroke leads to accelerated cognitive decline over time following the event. This is perhaps mediated by increased inflammation leading to degeneration of the thalamus, a central node in communication between brain regions. This accelerated brain-wide neurodegeneration caused by stroke is not as well understood as the mechanisms driving the immediate damage and aftermath of a stroke, however.

In today's open access paper, researchers consider an increased burden of cellular senescence in the brain resulting from a stroke as a possible contributing factor to further declining function over time. Senescent cells cease to replicate and secrete a pro-inflammatory mix of signals. In the short term the presence of senescent cells and their signaling helps to coordinate regeneration from injury, to the degree that the brain is capable of such regeneration. Over the long term, however, the sustained inflammatory signaling generated by senescent cells is disruptive to tissue structure and function. In this way, lingering senescent cells are a cause of degenerative aging, in the brain and elsewhere in the body.

Cellular senescence as a key contributor to secondary neurodegeneration in traumatic brain injury and stroke

Traumatic brain injury (TBI) and stroke pose major health challenges, impacting millions of individuals globally. Once considered solely acute events, these neurological conditions are now recognized as enduring pathological processes with long-term consequences, including an increased susceptibility to neurodegeneration. However, effective strategies to counteract their devastating consequences are still lacking.

Cellular senescence, marked by irreversible cell-cycle arrest, is emerging as a crucial factor in various neurodegenerative diseases. Recent research further reveals that cellular senescence may be a potential driver for secondary neurodegeneration following brain injury. This review offers critical insights into the role of cellular senescence in secondary neurodegeneration following TBI and stroke. A growing body of evidence underscores a strong connection between cellular senescence, inflammation, and neurodegeneration. Notably, senescent cells, a common pathological feature, are present in the brain after TBI or stroke.

Although the precise vulnerability of different cell types to senescence and their interactions remain underexplored, the targeted elimination of these cells has yielded promising preliminary results in mitigating brain injury-induced neuronal degeneration. These findings highlight a novel therapeutic target for addressing secondary neurodegeneration following brain insult. From a translational standpoint, further rigorous investigation into the safety and efficacy of senolytic agents is imperative, as it holds the potential to open new avenues for managing the long-term consequences of brain injury.

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Quantifying the Distance in Years Between Healthspan and Lifespan
https://www.fightaging.org/archives/2024/12/quantifying-the-distance-in-years-between-healthspan-and-lifespan/

That medical science has been able to slightly compensate for the forms of cell and tissue damage characteristic of aging, without in any way deliberately targeting these causes of age-related disease, enough to keep people alive for longer in ill health, is an impressive feat. It is very hard to keep a damaged machine working without fixing the damage, and vast efforts have been devoted to this end in the case of the human machine. We can see the results in terms of increased human life expectancy, albeit life lived in the shadow of frailty and ill health.

Realistically, this vast expenditure of resources is a misguided effort, a wasted effort, that should instead be devoted to attempts to repair the damage of aging, the underlying causes of frailty and ill health. The immediate past seems fairly dismal, but we can be optimistic about the future. At this point it seems inevitable that a great realignment of goals and priorities will take place within the medical research and development community. Enough resources are now devoted to addressing the damage of aging that we should start to see the first high profile successes in the years ahead, and those successes will light the way to the better path to the treatment of aging as a medical condition.

Today's open access paper is a quantification of the present problem; that vast expenditure has led only to gains in the time spent in poor health and diminished function at the end of of life. Therapies that can repair the damage of aging will not produce outcomes that look like this; they will instead extend healthy life span.

Global Healthspan-Lifespan Gaps Among 183 World Health Organization Member States

To quantify the healthspan-lifespan gap across the globe, investigate for sex disparities, and analyze morbidity and mortality associations., this retrospective cross-sectional study used the World Health Organization (WHO) Global Health Observatory as the global data source and acquired national-level data covering all continents. The 183 WHO member states were investigated. Statistical analysis was conducted from January to May 2024.

Changes in life expectancy and health-adjusted life expectancy, as well as the healthspan-lifespan gap were quantified for all participating member states. Gap assessment was stratified by sex. Correlations of the gap with morbidity and mortality were examined. The healthspan-lifespan gap has widened globally over the last 2 decades among 183 WHO member states, extending to 9.6 years. A sex difference was observed with women presenting a mean (standard deviation) healthspan-lifespan gap of 2.4 (0.5) years wider than men. Healthspan-lifespan gaps were positively associated with the burden of noncommunicable diseases and total morbidity, and negatively with mortality. The US presented the largest healthspan-lifespan gap, amounting to 12.4 years, underpinned by a rise in noncommunicable diseases.

This study identifies growing healthspan-lifespan gaps around the globe, threatening healthy longevity across worldwide populations. Women globally exhibited a larger healthspan-lifespan gap than men.

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The ARPA-H Proactive Solutions for Prolonging Resilience Program
https://www.fightaging.org/archives/2024/12/the-arpa-h-proactive-solutions-for-prolonging-resilience-program/

The Advanced Research Projects Agency for Health (ARPA-H) is more or less intended to be a DARPA for medical research and development. Government bodies tend to present a view on aging that is very driven by current concerns surrounding entitlements and costs incurred by age-related disease. The entire diverse, distributed community aimed at the development of treatments for aging is viewed through the lens of its ability to reduce predicted budget issues. This perhaps biases government support for aging research towards less risky, more incremental gains that can be implemented broadly, such as cheap supplements, preventative programs based on better measurement of health, and the like, rather than more risky projects with a much greater potential payoff, such as the various rejuvenation biotechnologies.

The ostensible point of the DARPA-like parts of the US government, including ARPA-H, is to provide support for the riskier projects. How well that works out in practice is a matter for debate; ARPA-H is far too young as an entity to draw conclusions, and all arms of government are pressured to be risk averse regardless of stated mission. A few figures from the aging research community and longevity industry have transitioned into running or working at ARPA-H programs, and we shall see how they do in the years ahead. The ARPA-H program noted in today's publicity materials is less adventurous than it might be, essentially starting as a data gathering exercise at scale, to lend weight to efforts to measure biological age. A consensus, functional means of determining biological age is absolutely needed, true enough, but many groups are already working on this challenge. It is a well funded undertaking.

ARPA-H launches new program aimed at extending the healthspan of Americans

The Advanced Research Projects Agency for Health (ARPA-H), an agency within the U.S. Department of Health and Human Services (HHS) announced a new funding opportunity through the launch of the PROactive Solutions for Prolonging Resilience, or PROSPR, program. The big question that drives the program is, "What if we had therapies to extend healthspan and prevent the onset of age-related diseases?"

"The ultimate goal is to extend healthspan - meaning the number of years aging adults live healthy lives and enjoy overall well-being by compressing the frailty and disability that comes with aging, into a shorter duration of time near the end of life." The PROSPR program builds on foundational work by the National Institute of Aging and will work with industry and regulators to accelerate the testing and availability of new therapeutics targeted at healthspan.

The number of people 65 and older accounts for 18% of the US population and is projected to increase to 23% by 2054. Considering their increased care needs relative to younger ages, health care costs will increase by 75% if nothing is done to prevent the progressive loss of physical functioning during aging. It is estimated that increasing the average American healthspan would lessen health care costs due to a combination of fewer medical needs, less reliance on assistance by others, and increased potential for individuals and their family caregivers to remain in the workforce. Because of these and other factors, it is estimated that extending healthspan by one year in only 10 percent of the aging population would reduce costs of U.S. entitlement programs by 29 billion per year and increase value to the national economy by 80 billion per year.

PROSPR: Proactive Solutions for Prolonging Resilience

What if we had therapies to extend healthspan and prevent the onset of age-related diseases? The PROactive Solutions for Prolonging Resilience (PROSPR) program aims to identify biochemical and physiological markers and develop assessment tools that will allow researchers to better understand and target the underlying causes of age-related disease. To achieve this goal, PROSPR will pioneer in-home data collection and clinical trial protocols that can assess age-associated health outcomes in just three years instead of decades of study, accelerating the availability of new therapies. If successful, PROSPR will build a new therapeutic industry with interventions focused on maintaining health during aging.

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MileAge, a Metabolomic Aging Clock
https://www.fightaging.org/archives/2024/12/mileage-a-metabolomic-aging-clock/

Any sufficiently large database of biological data obtained from individuals of different ages can be used to build an aging clock. Machine learning approaches can be used find algorithmic combinations of measures that, on average, map to chronological age, mortality risk, or a similar benchmark in the study population. Individuals with a clock age higher than their chronological age are then said to exhibit accelerated aging. The degree to which this approach actually produces good measures of biological age, meaning the burden of damage and dysfunction that causes eventual mortality, remains open to debate. It seems clear from the work conducted to date that some useful form of consensus assessment of aging will emerge eventually, and be used to speed up the development of therapies capable of reducing that measure of biological age.

New aging clocks are produced at a fair pace, a dozen or more every year at this point, even as many researchers are pushing for more of a focus on just a few specific clocks, trying to forge some consensus for a universally agreed upon clock to assess biological age. Today's open access paper is an example of yet another new clock. Here, researchers expand on recently published work to describe their metabolomic clock called MileAge, built on metabolite levels derived from blood samples in a human study population.

Metabolomic age (MileAge) predicts health and life span: A comparison of multiple machine learning algorithms

The increasing availability of high-dimensional molecular omics and neuroimaging data, for example, DNA methylation (DNAm) and magnetic resonance imaging, has enabled the development of biological aging clocks. These clocks are typically developed using statistical or machine learning algorithms that identify relationships between chronological age and molecular data. The difference between predicted age and chronological age can track with health outcomes. Aging clocks provide a more holistic view of a person's health and are more readily interpretable than many individual molecular markers, as they are expressed in units of years.

Metabolomics, the study of small molecules within cells, tissues, or organisms, is increasingly incorporated into biological aging research. Metabolites are the end products of metabolism, such as when food is converted to energy. Early metabolomics studies were limited to a few metabolites and small samples, but technological advancements have enabled the population-scale profiling of multiple molecular pathways. Quantifying hundreds or thousands of metabolites can provide detailed snapshots of an individual's physiological state. Metabolomic profiles can predict many common incident diseases and mortality risk.

This study aimed to benchmark machine learning algorithms for developing metabolomic aging clocks from nuclear magnetic resonance spectroscopy data. The UK Biobank data, including 168 plasma metabolites from up to N = 225,212 middle-aged and older adults (mean age, 56.97 years), were used to train and internally validate 17 algorithms. Metabolomic age (MileAge) delta, the difference between metabolite-predicted and chronological age, showed the strongest associations with health and aging markers. Individuals with an older MileAge were frailer, had shorter telomeres, were more likely to suffer from chronic illness, rated their health worse, and had a higher all-cause mortality hazard (hazard ratio = 1.51). MileAge can be applied in research and may find use in health assessments, risk stratification, and proactive health tracking.

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A Mouse Lineage Expressing Telomerase Exhibits Extended Life Span
https://www.fightaging.org/archives/2024/12/a-mouse-lineage-expressing-telomerase-exhibits-extended-life-span/

Telomeres are repeated DNA sequences at the ends of chromosomes. A little telomere length is lost with each cell division, a part of the machinery that limits the replication of somatic cells. Cells with very short telomeres become senescent or self-destruct. Stem cells and cancer cells employ telomerase to extend telomeres, evading the replication limit. The use of telomerase more broadly in the body has attracted attention, particularly given studies in mice demonstrating improved health and extended life span. One challenge here is that the telomere dynamics of mice are fairly different from those of humans, so it is unclear as to whether the benefits will be the same. In mice, it seems that any additional risk of cancer due to damaged cells being provided with telomerase is far outweighed by improvements to immune function and cancer suppression in later life. The only practical way to determine whether this is also true in humans is to attempt telomerase gene therapies and observe the results.

While previous research has demonstrated the therapeutic efficacy of telomerase reverse transcriptase (TERT) overexpression using adeno-associated virus and cytomegalovirus vectors to combat aging, the broader implications of TERT germline gene editing on the mammalian genome, proteomic composition, phenotypes, lifespan extension, and damage repair remain largely unexplored. In this study, we elucidate the functional properties of transgenic mice carrying the Tert transgene, guided by precise gene targeting into the Rosa26 locus via embryonic stem (ES) cells under the control of the elongation factor 1α (EF1α) promoter.

The Tert knock-in (TertKI) mice harboring the EF1α-Tert gene displayed elevated telomerase activity, elongated telomeres, and extended lifespan, with no spontaneous genotoxicity or carcinogenicity. The TertKI mice showed also enhanced wound healing, characterized by significantly increased expression of Fgf7, Vegf, and collagen. Additionally, TertKI mice exhibited robust resistance to the progression of colitis induced by dextran sodium sulfate (DSS), accompanied by reduced expression of disease-deteriorating genes. These findings foreshadow the potential of TertKI as an extraordinary rejuvenation force, promising not only longevity but also rejuvenation in skin and intestinal aging.

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The Longevity Pyramid, a Prevention Viewpoint
https://www.fightaging.org/archives/2024/12/the-longevity-pyramid-a-prevention-viewpoint/

One prevalent viewpoint in the research and development community is that a great deal of work lies ahead merely to shift the priorities of the medical community towards prevention in the matter of aging, and that the failure of the medical community to be more prevention-focused is wasting most of the potential of existing approaches that can modestly slow aging. Here we are talking about diagnostics for early stage disease, exercise, calorie restriction mimetic supplements, and the like. This is in contrast to those who would rather push forward to more impressive biotechnologies of rejuvenation, assuming that the demonstration of rejuvenation and consequent demand for such therapies will cause the medical community to reorganize its own priorities without the need for outside pressure.

The primary focus of medicine at the end of the 19th and early 20th centuries was the management of communicable diseases. Today's healthcare systems confront a different landscape: the prevalence of chronic diseases, which often develop over extended periods, with the most critical being the "top four": cardiovascular diseases, cancer, chronic respiratory diseases, and diabetes. Modern medicine has adapted various strategies in response to this shift, yet there is a tendency for chronic disease management to mirror approaches historically used for infectious diseases.

This has sometimes led to interventions being applied in the later stages of chronic diseases as symptom management becomes the predominant focus rather than early prevention. As a result, the healthcare stance today is often reactive, rather than proactive - addressing illness once it has already manifested. Without the adoption of new medical and wellness paradigms, the world is set to face an unsustainable burden of chronic diseases, which is already taking a substantial social and economic toll. To mitigate the age gradient in comorbidities, a health system focused on prevention rather than intervention is imperative. A shift in mindset is therefore needed, necessitating a transition toward long-term prevention strategies that align more appropriately with the gradual progression inherent to chronic diseases.

The present narrative review aims to provide insight into the "longevity pyramid" concept, a structure that effectively describes the various levels of longevity medicine interventions. At the base of the Longevity Pyramid lies the level of prevention, emphasizing early detection strategies and advanced diagnostics or timely identification of potential health issues. Moving upwards, the next step involves lifestyle modifications, health-promoting behaviors, and proactive measures to delay the onset of age-related conditions.

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FOXO3 is Involved in Elimination of Unfit Cells via Cell Competition
https://www.fightaging.org/archives/2024/12/foxo3-is-involved-in-elimination-of-unfit-cells-via-cell-competition/

Early multicellular organisms must have fairly quickly evolved mechanisms to eliminate damaged or otherwise unfit cells during development. Some of those mechanisms continue throughout life. We might expect to find that genes involved in these elimination processes affect the pace of aging, as should anything that reduces damage and increases robustness. Here researchers show that the known longevity-associated gene FOXO3 is an important player in the processes of cell competition that operate during early development, removing unfit cells to ensure that viable, functional tissues are generated. One might look at analogous work on the role of azot in fruit flies, also a longevity-associated gene involved in elimination of unfit cells.

In this study, we identified a previously unknown universal cell competition marker in vertebrates and elucidated the novel roles and mechanisms of physiological cell competition during organogenesis - the Shh-unfitness-driven cell competition. In zebrafish spinal cord and muscle development regulated by Shh morphogen gradients, unfit cells with abnormal Shh activity spontaneously appear and distort the morphogen gradient. Subsequently, unfit cells alter membrane N-cadherin levels, activate the Smad-Foxo3-ROS axis, and undergo apoptosis through communication with neighbouring normal cells. In zebrafish and mouse, Foxo3 is upregulated in cells with abnormal morphogen signalling and in various less-fit cells, which are eliminated through cell competition. Thus, Foxo3 can be a common marker of cell competition in vertebrates.

Artificially introduced cells with abnormal Myc or Axin2 activity trigger competitive communication with neighbouring normal cells in developing mouse organs (i.e. the heart, skin, and brain). These facts suggest that developing tissues can eliminate unfit cells through cell competition. However, whether unfit cells are generated and drive cell competition during physiological organogenesis is poorly understood. This is partly due to the inherent difficulty in capturing spontaneously arising abnormal cells. In our zebrafish model, which is well-suited for imaging analyses, we previously captured the emergence of unfit cells during embryogenesis. In this study, we visualised abnormal cell appearance and endogenous cell competition in vertebrate organogenesis and elucidated their regulatory mechanisms. Furthermore, we demonstrated that eliminating these unfit cells is essential for proper organogenesis. Thus, we have revealed the physiological significance of cell competition during organogenesis.

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Circadian Rhythm and the Inflammasome
https://www.fightaging.org/archives/2024/12/circadian-rhythm-and-the-inflammasome/

The research noted here, showing that innate immune responses are regulated by circadian rhythm, is interesting in the context of aging. Aging is characterized by both a complex disruption of circadian rhythm, alongside a growing state of constant inflammation, some of which is generated by maldaptive innnate immune reactions to the molecular damage that becomes more prevalent with age, such as mislocalized mitochondrial DNA resulting from mitochondrial dysfunction. To what degree is the chronic inflammation of aging made worse by issues with regulation of circadian rhythm? This is a question yet to be definitively answered.

New research the link between the immune system and the body's circadian rhythms often referred to as the body clock. Macrophages, immune cells that detect and respond to harmful substances, are able to trigger inflammation as a defence mechanism by assembling large complexes known as inflammasomes. Inflammasomes could be compared to 'smoke detectors' that will then alert the immune system of danger.

Activation of an inflammasome called NLRP3 was not found to be constant throughout the day but was regulated by the body's 24-hour circadian clock. This daily rhythm determines when macrophages are most efficient at detecting threats and when their energy levels peak to mount a response. The research also highlights a key role for mitochondria, the cell's energy producers, in driving these daily changes in immune activity. The study has significant implications for understanding and treating inflammatory diseases, such as arthritis, where overactive inflammasomes play a key role. Symptoms of such diseases often worsen in the morning, something this research may help explain.

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More Evidence for a Dysfunctional Gut Microbiome in Alzheimer's Disease
https://www.fightaging.org/archives/2024/12/more-evidence-for-a-dysfunctional-gut-microbiome-in-alzheimers-disease/

A growing body of evidence correlates an altered gut microbiome with Alzheimer's disease. The gut microbiome changes with age in ways that provoke chronic inflammation and tissue dysfunction, but it isn't clear that alterations characteristic of Alzheimer's are contributing to the condition, versus being, say, a consequence of immune dysfunction. The study noted here is a recent example of this line of research, one again showing that the state of the gut microbiome can be correlated with Alzheimer's progression.

Accumulating evidence suggested that Alzheimer's disease (AD) was associated with altered gut microbiota. A total of 64 subjects (18 mild AD, 23 severe AD and 23 healthy control) were recruited in the study. 16s rDNA sequencing was performed for the gut bacteria composition, followed by liquid chromatography electrospray ionization tandem mass spectrometry (LC/MS/MS) analysis of short-chain fatty acids (SCFAs). The global cognition, specific cognitive domains (abstraction, orientation, attention, language, etc.) and severity of cognitive impairment, were evaluated by Montreal Cognitive Assessment (MoCA) scores. We further identified characteristic bacteria and SCFAs, and receiver operating characteristic (ROC) curve was used to determine the predictive value.

Our results showed that the microbiota dysbiosis index was significantly higher in the severe and mild AD patients compared to the healthy control (HC). Linear discriminant analysis (LDA) showed that 12 families and 17 genera were identified as key microbiota among three groups. The abundance of Butyricicoccus was positively associated with abstraction, and the abundance of Lachnospiraceae_UCG-004 was positively associated with attention, language, orientation in AD patients. Moreover, the levels of isobutyric acid and isovaleric acid were both significantly negatively correlated with abstraction, and level of propanoic acid was significantly positively associated with the attention. In addition, ROC models based on the characteristic bacteria Lactobacillus, Butyricicoccus and Lachnospiraceae_UCG-004 could effectively distinguished between low and high orientation in AD patients (area under curve is 0.891), and Butyricicoccus and Agathobacter or the combination of SCFAs could distinguish abstraction in AD patients (area under curve is 0.797 and 0.839 respectively).

These findings revealed the signatures gut bacteria and metabolite SCFAs of AD patients and demonstrated the correlations between theses characteristic bacteria and SCFAs and specific cognitive domains, highlighting their potential value in early detection, monitoring, and intervention strategies for AD patients.

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Towards Regeneration of Aged Neuromuscular Junctions
https://www.fightaging.org/archives/2024/12/towards-regeneration-of-aged-neuromuscular-junctions/

The neuromuscular junction is a small, complex structure linking the nervous system to muscle fibers. A body of evidence suggests that degeneration of neuromuscular junctions is important in the age-related loss of muscle mass and strength leading to sarcopenia, though it remains unclear as to which mechanisms of aging are most important in causing this degeneration. Here, researchers provide a short overview of the problem and present thinking on therapeutic options to address it by provoking regeneration of lost structures and function.

The neuromuscular junction (NMJ) is an essential synaptic structure composed of motor neurons, skeletal muscles, and glial cells that orchestrate the critical process of muscle contraction. Degenerated NMJs exhibit smaller or fragmented endplates, partial denervation, reduced numbers of synaptic vesicles, abnormal presynaptic mitochondria, and dysfunctional perisynaptic Schwann cells.

Sarcopenia, a degenerative skeletal muscle disease characterized by the loss of muscle strength, muscle mass, and overall physical activity, is closely associated with aging. Although sarcopenia shares some pathological features with muscular dystrophy, the exact mechanisms underlying muscle weakness observed in aging populations are not fully understood. Aging muscles display a range of neural changes, including alterations in peripheral nerves and NMJs, which may initiate a cascade of muscle pathologies.

Aging negatively impacts axonal transport, thereby affecting the delivery of essential synaptic and energetic cargoes, and is accompanied by alterations in neurofilaments. NMJ changes such as axonal denervation, reinnervation, and remodeling are increasingly recognized as pivotal in the onset and progression of sarcopenia. Research in both animal models and human subjects has demonstrated age-related NMJ degradation with significant changes in synaptic transmission and a shift in the types of muscle fibers present. Interestingly, caloric restriction and exercise attenuated the alteration of NMJs by aging. These studies support the hypothesis that targeting NMJ pathology can be a viable therapeutic approach, as evidenced by the improvements in muscle weakness observed in sarcopenia models following NMJ intervention.

Regarding the assessment on whether these NMJ alterations are reversible, AAV-mediated gene therapy, which enhances the expression of NMJ proteins such as MuSK, Rapsyn, or Dok7, has improved NMJ structure and muscular function in models of muscular dystrophy and sarcopenia. These therapies are not yet ready for clinical trials. Glial cells, including perisynaptic Schwann cells and satellite cells, are proposed to play a crucial role in maintaining NMJs. Thus, developing therapies targeting these neurons and glial cells is essential, because focusing only on the NMJ may not achieve the best therapeutic outcomes. Owing to their multiple actions on NMJs and glial cells, supplementation with neurotrophic factors could be a promising approach.

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Cytomegalovirus as a Contributing Cause of Some Alzheimer's Disease
https://www.fightaging.org/archives/2024/12/cytomegalovirus-as-a-contributing-cause-of-some-alzheimers-disease/

There is the suspicion that Alzheimer's disease, like Parkinson's disease, is in fact two or more distinct conditions with quite different root causes that converge on a similar outcome. Whenever there is a struggle to produce good correlations, with competing studies showing different results, it is plausible that the conflicting data arises because different subtypes of the condition are more or less prevalent in one study versus another. Here, researchers propose that one subtype of Alzheimer's disease arises from the persistent presence of cytomegalovirus (CMV) and its interaction with maladaptive innate immune responses. CMV is already implicated in age-related immune issues, so it would not be too surprising to find it causes other prevalent issues in old age.

The emergence of single nucleus RNA sequencing (snRNAseq) studies of Alzheimer's disease (AD) and aging-affected brain tissue has demonstrated the powerful opportunity for cell transcriptomics to illuminate and resolve disease mechanisms. Using 101 (AD n = 66, aged controls n = 35) exceptionally well-characterized, aged subjects from the Arizona Study of Aging and Neurodegenerative Disorders (AZSAND)/Brain and Body Donation Program (BBDP), We identified a differentially abundant AD-associated CD83(+) microglial subtype, detected in 47% of AD subjects and 25% of clinically and neuropathologically unaffected controls.

Given that CD83 is a marker of mature dendritic cells, with complex, bidirectional interactions with diverse pathogens and its role in activated microglia during neuroinflammation, we hypothesized that CD83(+) AD subjects may differ from CD83(-) AD subjects on the basis of a microbial or immunological perturbation. Mass spectrometry proteomics data from frozen transverse colon (TC) samples collected from a subset of 26 subjects revealed the most differentially abundant protein in subjects with CD83(+) microglia was immunoglobulin heavy constant gamma 4 (IGHG4) which forms the constant region of the immunoglobulin IgG4 antibody heavy chain. This observation was suggestive of increased IgG4 tissue response in the TC of AD subjects with CD83(+) microglia and more broadly, consistent with a potential microbial interaction between components of the gut microbiome and the presence of CD83(+) microglia.

We report a series of significant associations linking CD83(+) microglia in the superior frontal gyrus (SFG) with IgG4 and human cytomegalovirus (HCMV) presence in the TC, anti-HCMV IgG4 antibodies in the CSF, and both IgG4 and HCMV in the vagus nerve and SFG. HCMV histochemistry is consistent with an active HCMV infection. Findings indicate complex, cross-tissue interactions between HCMV and the adaptive immune response associated with CD83(+) microglia in persons with AD. This may indicate an opportunity for antiviral therapy in persons with AD and biomarker evidence of HCMV infection.

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T Cells Infiltrating the Brain Provoke Transcriptomic Aging in Near Neighbor Cells
https://www.fightaging.org/archives/2024/12/t-cells-infiltrating-the-brain-provoke-transcriptomic-aging-in-near-neighbor-cells/

Researchers here develop transcriptomic clocks for brain aging and use them to observe near neighbor effects between cell types in the brain. Neural stem cells reduce the pace of age-related changes in transcription in surrounding cells, whereas T cells of the adaptive immune system accelerate transcriptomic aging in neighboring cells, where they infiltrate the brain. While there are some paths for T cells to enter the brain in small numbers even in youth, the blood-brain barrier blocks the majority of routes. This barrier becomes dysfunctional with age, however, allowing inappropriate cells and molecules into the brain to cause inflammation and disrupted function. The work here is one viewpoint of that disruption.

Old age is associated with a decline in cognitive function and an increase in neurodegenerative disease risk. Brain ageing is complex and is accompanied by many cellular changes. Furthermore, the influence that aged cells have on neighbouring cells and how this contributes to tissue decline is unknown. More generally, the tools to systematically address this question in ageing tissues have not yet been developed. Here we generate a spatially resolved single-cell transcriptomics brain atlas of 4.2 million cells from 20 distinct ages across the adult lifespan and across two rejuvenating interventions - exercise and partial reprogramming. We build spatial ageing clocks, machine learning models trained on this spatial transcriptomics atlas, to identify spatial and cell-type-specific transcriptomic fingerprints of ageing, rejuvenation and disease, including for rare cell types.

Using spatial ageing clocks and deep learning, we find that T cells, which increasingly infiltrate the brain with age, have a marked pro-ageing proximity effect on neighbouring cells. Surprisingly, neural stem cells have a strong pro-rejuvenating proximity effect on neighbouring cells. We also identify potential mediators of the pro-ageing effect of T cells and the pro-rejuvenating effect of neural stem cells on their neighbours. These results suggest that rare cell types can have a potent influence on their neighbours and could be targeted to counter tissue ageing. Spatial ageing clocks represent a useful tool for studying cell-cell interactions in spatial contexts and should allow scalable assessment of the efficacy of interventions for ageing and disease.

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Worse Vascular Health Accelerates a Measure of Brain Aging
https://www.fightaging.org/archives/2024/12/worse-vascular-health-accelerates-a-measure-of-brain-aging/

Worse cardiovascular function is known to correlate with risk of neurodegenerative conditions. Evidence points to a range of mechanisms that include reduced cerebral blood flow, hypertension, atherosclerosis, and a dysfunctional blood-brain barrier. Here researchers use an aging clock based on analysis of brain imaging to compare the aging of the brain, as assessed this way, with various aspects of health and lifestyle. As might be expected, risk factors for cardiovascular disease are also correlated with accelerated brain aging.

This study investigated the associations of brain age gap (BAG) - a biological marker of brain resilience - with life exposures, neuroimaging measures, biological processes, and cognitive function. In this population-based cross-sectional study of septuagenarians, findings highlight that physical inactivity, diabetes, and stroke or transient ischemic attack (TIA) were independently associated with higher BAG, reflecting older-appearing brains. Conversely, prediabetes was associated with younger-appearing brains (lower BAG), but this became statistically not significant after adjustment for all risk factors simultaneously. Regular physical activity moderated the obesity-BAG relationship, yielding the lowest BAG in individuals with obesity who were physically active.

Greater cortical thickness, particularly in AD- and resilience-related regions, was linked to lower BAG. Conversely, a higher burden of small vessel disease, white-matter microstructural alterations, systemic inflammation, and high blood glucose levels were associated with a greater BAG, highlighting their influence on brain health in late life. Greater BAG was also related to poorer cognitive outcomes, particularly attention/speed and visuospatial abilities. Notably, sex-specific associations emerged, suggesting distinct pathological and resilience pathways to cognitive disorders between females and males. Together, these findings confirm that vascular-related lifestyles and health factors likely contribute to shaping the appearance of the brain during the aging process. The interplay between vascular brain injury, inflammation, and insulin-related dysregulations may be the key to understanding the neurobiological underpinnings of BAG, therefore, of resilience mechanisms in aging.

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Approaches to Targeting Phosphorylated Tau Protein in the Aging Brain
https://www.fightaging.org/archives/2024/12/approaches-to-targeting-phosphorylated-tau-protein-in-the-aging-brain/

Tau protein in the brain can become overly phosphorylated, and the resulting clumped proteins form solid aggregates that are disruptive to cell and tissue function. Clearing out this phosphorylated protein is one of the strategies under development for the treatment of Alzheimer's disease - without noteworthy clinical success so far, but recall that it took something like twenty years and innumerable clinical trials to produce a working approach to amyloid-β clearance. Many different therapeutic approaches to targeting specifically phosphorylated tau are presently at some stage of development, and here find a review of the current landscape.

Hyperphosphorylation of tau initiates the intracellular formation of neurofibrillary tangles, a hallmark of a collection of neurodegenerative diseases named tauopathies, including Alzheimer's disease (AD), frontotemporal dementia (FTD), Pick's disease, multiple system atrophy, etc. Intracellular accumulation of hyperphosphorylated tau (pTau) decreases microtubule stability, induces protein aggregation, and impairs neuronal plasticity. Therefore, downregulation or removal of hyperphosphorylated tau (pTau) holds promise for the therapy of these diseases.

However, there remains a great challenge in the development of pTau-targeted drugs. For example, direct application of either tau kinase inhibitors or phosphatase activators may induce unacceptable toxic side effects, because the majority of these enzymes concurrently modulate many signaling pathways other than tau. Another way to eliminate pTau is immunotherapy, which employs tau-targeted antibodies to specifically facilitate tau degradation. Although these antibody drugs have shown moderate efficacy for alleviating cognitive impairment in AD patients, they are usually high-cost and it is generally difficult for antibodies to penetrate into the cells to bind tau.

A new kind of hetero-bifunctional molecule, namely targeting chimera, has attracted increasing attention in drug discovery in recent years for its ability to recognize and change the property of a certain protein of interest (POI), typically by enhancing the proximity between the POI and a specific effector, such as ubiquitin ligases for proteolysis targeting chimeras (PROTACs), and autophagosome protein LC3 for autophagy-tethering compounds (ATTECs). Several pTau targeting TACs have been developed in recent years, including dephosphorylation-targeting chimeras (DEPTACs), proteolysis targeting chimeras (PROTACs) for pTau, phosphorylation targeting chimeras (phosTACs), and affinity-directed phosphatase (AdPhosphatases) system.

In this review, we briefly introduce tau and its role in neurodegenerative diseases, provide progress in the development of pTau targeting therapies, and discuss their advantages and limitations.

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MileAge, a Metabolomic Aging Clock

Any sufficiently large database of biological data obtained from individuals of different ages can be used to build an aging clock. Machine learning approaches can be used find algorithmic combinations of measures that, on average, map to chronological age, mortality risk, or a similar benchmark in the study population. Individuals with a clock age higher than their chronological age are then said to exhibit accelerated aging. The degree to which this approach actually produces good measures of biological age, meaning the burden of damage and dysfunction that causes eventual mortality, remains open to debate. It seems clear from the work conducted to date that some useful form of consensus assessment of aging will emerge eventually, and be used to speed up the development of therapies capable of reducing that measure of biological age.

New aging clocks are produced at a fair pace, a dozen or more every year at this point, even as many researchers are pushing for more of a focus on just a few specific clocks, trying to forge some consensus for a universally agreed upon clock to assess biological age. Today's open access paper is an example of yet another new clock. Here, researchers expand on recently published work to describe their metabolomic clock called MileAge, built on metabolite levels derived from blood samples in a human study population.

Metabolomic age (MileAge) predicts health and life span: A comparison of multiple machine learning algorithms

The increasing availability of high-dimensional molecular omics and neuroimaging data, for example, DNA methylation (DNAm) and magnetic resonance imaging, has enabled the development of biological aging clocks. These clocks are typically developed using statistical or machine learning algorithms that identify relationships between chronological age and molecular data. The difference between predicted age and chronological age can track with health outcomes. Aging clocks provide a more holistic view of a person's health and are more readily interpretable than many individual molecular markers, as they are expressed in units of years.

Metabolomics, the study of small molecules within cells, tissues, or organisms, is increasingly incorporated into biological aging research. Metabolites are the end products of metabolism, such as when food is converted to energy. Early metabolomics studies were limited to a few metabolites and small samples, but technological advancements have enabled the population-scale profiling of multiple molecular pathways. Quantifying hundreds or thousands of metabolites can provide detailed snapshots of an individual's physiological state. Metabolomic profiles can predict many common incident diseases and mortality risk.

This study aimed to benchmark machine learning algorithms for developing metabolomic aging clocks from nuclear magnetic resonance spectroscopy data. The UK Biobank data, including 168 plasma metabolites from up to N = 225,212 middle-aged and older adults (mean age, 56.97 years), were used to train and internally validate 17 algorithms. Metabolomic age (MileAge) delta, the difference between metabolite-predicted and chronological age, showed the strongest associations with health and aging markers. Individuals with an older MileAge were frailer, had shorter telomeres, were more likely to suffer from chronic illness, rated their health worse, and had a higher all-cause mortality hazard (hazard ratio = 1.51). MileAge can be applied in research and may find use in health assessments, risk stratification, and proactive health tracking.

Approaches to Targeting Phosphorylated Tau Protein in the Aging Brain

Tau protein in the brain can become overly phosphorylated, and the resulting clumped proteins form solid aggregates that are disruptive to cell and tissue function. Clearing out this phosphorylated protein is one of the strategies under development for the treatment of Alzheimer's disease - without noteworthy clinical success so far, but recall that it took something like twenty years and innumerable clinical trials to produce a working approach to amyloid-β clearance. Many different therapeutic approaches to targeting specifically phosphorylated tau are presently at some stage of development, and here find a review of the current landscape.

Hyperphosphorylation of tau initiates the intracellular formation of neurofibrillary tangles, a hallmark of a collection of neurodegenerative diseases named tauopathies, including Alzheimer's disease (AD), frontotemporal dementia (FTD), Pick's disease, multiple system atrophy, etc. Intracellular accumulation of hyperphosphorylated tau (pTau) decreases microtubule stability, induces protein aggregation, and impairs neuronal plasticity. Therefore, downregulation or removal of hyperphosphorylated tau (pTau) holds promise for the therapy of these diseases.

However, there remains a great challenge in the development of pTau-targeted drugs. For example, direct application of either tau kinase inhibitors or phosphatase activators may induce unacceptable toxic side effects, because the majority of these enzymes concurrently modulate numerous signaling pathways other than tau. Another way to eliminate pTau is immunotherapy, which employs tau-targeted antibodies to specifically facilitate tau degradation. Although these antibody drugs have shown moderate efficacy for alleviating cognitive impairment in AD patients, they are usually high-cost and it is generally difficult for antibodies to penetrate into the cells to bind tau.

A new kind of hetero-bifunctional molecule, namely targeting chimera, has attracted increasing attention in drug discovery in recent years for its ability to recognize and change the property of a certain protein of interest (POI), typically by enhancing the proximity between the POI and a specific effector, such as ubiquitin ligases for proteolysis targeting chimeras (PROTACs), and autophagosome protein LC3 for autophagy-tethering compounds (ATTECs). Several pTau targeting TACs have been developed in recent years, including dephosphorylation-targeting chimeras (DEPTACs), proteolysis targeting chimeras (PROTACs) for pTau, phosphorylation targeting chimeras (phosTACs), and affinity-directed phosphatase (AdPhosphatases) system.

In this review, we briefly introduce tau and its role in neurodegenerative diseases, provide progress in the development of pTau targeting therapies, and discuss their advantages and limitations.

Link: https://doi.org/10.1016/j.medp.2024.100060

Worse Vascular Health Accelerates a Measure of Brain Aging

Worse cardiovascular function is known to correlate with risk of neurodegenerative conditions. Evidence points to a range of mechanisms that include reduced cerebral blood flow, hypertension, atherosclerosis, and a dysfunctional blood-brain barrier. Here researchers use an aging clock based on analysis of brain imaging to compare the aging of the brain, as assessed this way, with various aspects of health and lifestyle. As might be expected, risk factors for cardiovascular disease are also correlated with accelerated brain aging.

This study investigated the associations of brain age gap (BAG) - a biological marker of brain resilience - with life exposures, neuroimaging measures, biological processes, and cognitive function. In this population-based cross-sectional study of septuagenarians, findings highlight that physical inactivity, diabetes, and stroke or transient ischemic attack (TIA) were independently associated with higher BAG, reflecting older-appearing brains. Conversely, prediabetes was associated with younger-appearing brains (lower BAG), but this became statistically not significant after adjustment for all risk factors simultaneously. Regular physical activity moderated the obesity-BAG relationship, yielding the lowest BAG in individuals with obesity who were physically active.

Greater cortical thickness, particularly in AD- and resilience-related regions, was linked to lower BAG. Conversely, a higher burden of small vessel disease, white-matter microstructural alterations, systemic inflammation, and high blood glucose levels were associated with a greater BAG, highlighting their influence on brain health in late life. Greater BAG was also related to poorer cognitive outcomes, particularly attention/speed and visuospatial abilities. Notably, sex-specific associations emerged, suggesting distinct pathological and resilience pathways to cognitive disorders between females and males. Together, these findings confirm that vascular-related lifestyles and health factors likely contribute to shaping the appearance of the brain during the aging process. The interplay between vascular brain injury, inflammation, and insulin-related dysregulations may be the key to understanding the neurobiological underpinnings of BAG, therefore, of resilience mechanisms in aging.

Link: https://doi.org/10.1002/alz.14435